Installation

You can install MasterMSM by simply downloading the package from the GitHub repository and using the standard installation instructions for packages built using Distutils.

git clone http://github.com/daviddesancho/mastermsm destination/mastermsm
cd destination/mastermsm
python setup.py install --user

Parallel processing in Python and MasterMSM

In MasterMSM we make ample use of the multiprocessing library, which for MacOS X can conflict with non-Python libraries. In the past we have found this to be a problem that can result in segmentation faults. Digging in the internet I found a workaround for this problem, by setting the following environment variable

export VECLIB_MAXIMUM_THREADS=1

This should be set in the terminal before you start your Python session in case you meet this problem.